Nicotiana tabacumAssembly Name:Ntab-TN90
Gene File:GCF_000715135.1_Ntab-TN90_protein.faa.gz
| Position on the Genome | Gene Name | CDS | lcl|NW_015889305.1_cds_XP_016443999.1_39106 |
| PEP | XP_016443999.1 |
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| Position on the Genome | Chromosome | NW_015889305.1 | |
| Start Position | 189026 | ||
| End Position | 197303 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00414487 |
|---|---|---|---|
| KusakiDB version | 2.0 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | E3 Ubiquitin ligase, GIDE-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RING-type E3 ubiquitin transferase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF12483 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013083,IPR001841,IPR022170 |
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| InterPro Description | Details | ||
| GO ID | GO:0046872,GO:0006996,GO:0016020,GO:0004842,GO:0016874 |
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| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0019787,GO:0006996,GO:0006464,GO:0016874,GO:0016020 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Nicotiana tabacum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
